Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf932 domain-containing proteinDM483_08435Not AvailableNegative1724000 - 172496836102.9
hypothetical proteinDM483_08440Not AvailableNegative1725066 - 172539510414.9
antitoxinDM483_08445Not AvailablePositive1725600 - 17258458886.76
ribbon-helix-helix protein, copg familyDM483_08450Not AvailablePositive1725970 - 172624210374.1
type ii toxin-antitoxin system rele/pare family toxinDM483_08455Not AvailablePositive1726230 - 172652311188.3
site-specific integraseDM483_08460Not AvailableNegative1726517 - 172792653209.8
lysr family transcriptional regulatorDM483_08465Not AvailableNegative1728449 - 172937534583.5
sdr family nad(p)-dependent oxidoreductaseDM483_08470Not AvailablePositive1729489 - 173022025147.4
4-oxalocrotonate tautomeraseDM483_08475Not AvailablePositive1730290 - 17304997896.4
duf1993 domain-containing proteinDM483_08485Not AvailablePositive1730851 - 173136919068.0

Displaying genes 1731 – 1740 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.