Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
redoxinDM483_07930Not AvailablePositive1628292 - 162880718960.4
shikimate dehydrogenaseDM483_07935Not AvailableNegative1628921 - 162976930094.2
3-dehydroquinate dehydratase 2DM483_07940Not AvailableNegative1629766 - 163021516211.5
tolc family proteinDM483_07945Not AvailablePositive1630478 - 163173144810.0
efflux rnd transporter periplasmic adaptor subunitDM483_07950Not AvailablePositive1631724 - 163293842694.1
cusa/czca family heavy metal efflux rnd transporterDM483_07955Not AvailablePositive1632955 - 1636101112814.0
mfs transporterDM483_07960Not AvailableNegative1636134 - 163747147199.8
para family proteinDM483_07965Not AvailableNegative1637652 - 163842828601.5
sensor domain-containing diguanylate cyclaseDM483_07970Not AvailableNegative1638588 - 164015957441.4
hypothetical proteinDM483_07975Not AvailableNegative1640219 - 164069817919.4

Displaying genes 1631 – 1640 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.