Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe/s-dependent 2-methylisocitrate dehydratase acndDM483_07565Not AvailablePositive1543418 - 154600693967.3
2-methylaconitate cis-trans isomerase prpfDM483_07570Not AvailablePositive1546072 - 154726241314.3
2-methylcitrate dehydrataseDM483_07575Not AvailablePositive1547429 - 154891354863.8
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseDM483_07580Not AvailableNegative1548988 - 155159793615.3
duf1289 domain-containing proteinDM483_07585Not AvailablePositive1551967 - 155248520098.5
6-carboxytetrahydropterin synthase quedDM483_07590Not AvailableNegative1552496 - 155285213548.1
hypothetical proteinDM483_07600Not AvailablePositive1553089 - 15533017519.3
zeta toxinDM483_07605Not AvailablePositive1553298 - 155402927661.4
hypothetical proteinDM483_07610Not AvailablePositive1554026 - 15542237212.65
patatin-like phospholipase family proteinDM483_07615Not AvailableNegative1554335 - 155541439560.9

Displaying genes 1561 – 1570 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.