Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorDM483_07070Not AvailableNegative1446329 - 144720731937.8
hypothetical proteinDM483_07075Not AvailablePositive1447310 - 144773816051.0
hypothetical proteinDM483_07080Not AvailableNegative1447778 - 144882738664.6
gntr family transcriptional regulatorDM483_07085Not AvailableNegative1448979 - 144964724734.8
fadr family transcriptional regulatorDM483_07090Not AvailableNegative1449664 - 145036225081.1
c4-dicarboxylate transporter dctaDM483_07095Not AvailableNegative1450406 - 145171645874.5
xre family transcriptional regulatorDM483_07100Not AvailableNegative1451944 - 145225811471.8
pas domain s-box proteinDM483_07105Not AvailablePositive1452525 - 145409055032.7
ggdef domain-containing proteinDM483_07110Not AvailablePositive1454104 - 145579262895.2
sigma-54-dependent fis family transcriptional regulatorDM483_07115Not AvailableNegative1455899 - 145764764108.7

Displaying genes 1501 – 1510 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.