Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alginate o-acetyltransferase algfDM483_05320Not AvailableNegative1098886 - 109953322283.6
alginate o-acetyltransferaseDM483_05325Not AvailableNegative1099554 - 110071142677.6
alginate o-acetylaseDM483_05330Not AvailableNegative1100723 - 110218055454.8
mannuronate-specific alginate lyaseDM483_05335Not AvailableNegative1102322 - 110342540990.6
alginate biosynthesis protein algxDM483_05340Not AvailableNegative1103434 - 110487353359.2
poly(beta-d-mannuronate) c5 epimeraseDM483_05345Not AvailableNegative1104887 - 110644657939.3
alginate biosynthesis protein algeDM483_05350Not AvailableNegative1106469 - 110794754565.8
sel1 repeat family proteinDM483_05355Not AvailableNegative1107944 - 110937751712.8
alginate biosynthesis protein alg44DM483_05360Not AvailableNegative1109388 - 111055441935.0
glycosyl transferaseDM483_05365Not AvailableNegative1110592 - 111207356059.4

Displaying genes 1221 – 1230 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.