Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase sigma-70 factorDM483_04975Not AvailableNegative1031595 - 103210119242.3
excinuclease abc subunit uvraDM483_04980Not AvailableNegative1032190 - 103470691090.7
type vi secretion system protein tssaDM483_04985Not AvailableNegative1034874 - 103595939855.3
hcp1 family type vi secretion system effectorDM483_04990Not AvailableNegative1036055 - 103657318500.7
type vi secretion system membrane subunit tssmDM483_04995Not AvailableNegative1036717 - 103921293149.4
type vi secretion system-associated protein tagfDM483_05000Not AvailableNegative1039209 - 104011733830.6
imcf-like family proteinDM483_05005Not AvailableNegative1040114 - 1043917138664.0
dotu family type iv/vi secretion system proteinDM483_05010Not AvailableNegative1043948 - 104466426869.3
type vi secretion system baseplate subunit tsskDM483_05015Not AvailableNegative1044661 - 104600450037.1
type vi secretion system lipoprotein tssjDM483_05020Not AvailableNegative1046001 - 104672325946.7

Displaying genes 1161 – 1170 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.