Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 13269 - 13358 | Not Available |
| lytic murein transglycosylase | SAMN06295984_0013 | Not Available | Positive | 13486 - 14577 | 39940.6 |
| rare lipoprotein a | SAMN06295984_0014 | Not Available | Positive | 14561 - 15571 | 34443.8 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN06295984_0015 | Not Available | Positive | 15575 - 16801 | 43451.7 |
| thymidylate kinase | SAMN06295984_0016 | Not Available | Positive | 16798 - 17424 | 22087.2 |
| dna polymerase iii, delta prime subunit | SAMN06295984_0017 | Not Available | Positive | 17412 - 18404 | 35764.5 |
| methionyl-trna synthetase | SAMN06295984_0018 | Not Available | Positive | 18443 - 20011 | 58897.6 |
| tatd dnase family protein | SAMN06295984_0019 | Not Available | Positive | 20011 - 20787 | 28165.0 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN06295984_0020 | Not Available | Positive | 20801 - 21565 | 27964.3 |
| hypothetical protein | SAMN06295984_0021 | Not Available | Positive | 21562 - 21738 | 6395.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.