Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN06295984_0726 | Not Available | Positive | 742520 - 743038 | 18889.3 |
| conserved hypothetical protein | SAMN06295984_0727 | Not Available | Positive | 743035 - 743802 | 26058.7 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN06295984_0728 | Not Available | Positive | 743799 - 745205 | 48219.9 |
| methionine-gamma-lyase | SAMN06295984_0729 | Not Available | Positive | 745280 - 746572 | 46010.1 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN06295984_0730 | Not Available | Negative | 746611 - 747330 | 26494.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN06295984_0731 | Not Available | Positive | 747438 - 748544 | 40138.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN06295984_0732 | Not Available | Positive | 748544 - 749368 | 29696.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN06295984_0733 | Not Available | Positive | 749368 - 750309 | 33098.5 |
| cholesterol transport system auxiliary component | SAMN06295984_0734 | Not Available | Positive | 750324 - 750932 | 21456.0 |
| quaternary ammonium compound-resistance protein suge | SAMN06295984_0735 | Not Available | Positive | 751094 - 751414 | 11076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.