Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, uup | SAMN06295984_0593 | Not Available | Positive | 610559 - 612340 | 64629.1 |
| ssu ribosomal protein s21p | SAMN06295984_0594 | Not Available | Negative | 612440 - 612646 | 8349.36 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN06295984_0595 | Not Available | Positive | 612918 - 613682 | 28637.4 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN06295984_0596 | Not Available | Positive | 613710 - 614255 | 19530.3 |
| nickel/cobalt transporter regulator | SAMN06295984_0597 | Not Available | Positive | 614368 - 615219 | 34480.2 |
| imidazolonepropionase | SAMN06295984_0598 | Not Available | Positive | 615344 - 616621 | 43892.9 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) | SAMN06295984_0599 | Not Available | Negative | 616633 - 619185 | 91831.8 |
| fatty acid desaturase | SAMN06295984_0600 | Not Available | Positive | 619426 - 620457 | 37860.8 |
| hypothetical protein | SAMN06295984_0601 | Not Available | Negative | 620418 - 621224 | 28502.0 |
| hypothetical protein | SAMN06295984_0602 | Not Available | Negative | 621217 - 622068 | 31516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.