Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-5'-monophosphate dehydrogenase | SAMN06295984_0433 | Not Available | Negative | 449340 - 450797 | 51236.8 |
| hypothetical protein | SAMN06295984_0434 | Not Available | Negative | 450992 - 451294 | 10813.2 |
| hypothetical protein | SAMN06295984_0435 | Not Available | Negative | 451372 - 451758 | 13208.7 |
| predicted arabinose efflux permease, mfs family | SAMN06295984_0436 | Not Available | Positive | 451810 - 453051 | 43134.6 |
| diguanylate cyclase | SAMN06295984_0437 | Not Available | Positive | 453128 - 454261 | 41609.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN06295984_0438 | Not Available | Negative | 454293 - 455183 | 32536.7 |
| l-threonine synthase | SAMN06295984_0439 | Not Available | Negative | 455176 - 456573 | 50013.7 |
| cytochrome oxidase assembly protein shyy1 | SAMN06295984_0440 | Not Available | Negative | 456601 - 457269 | 23679.0 |
| uncharacterized conserved protein, duf983 family | SAMN06295984_0441 | Not Available | Negative | 457253 - 457696 | 15659.9 |
| cytochrome c oxidase subunit 3 | SAMN06295984_0442 | Not Available | Negative | 457656 - 458531 | 32381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.