Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb2 | SAMN06295984_3458 | Not Available | Negative | 3549764 - 3550105 | 12135.5 |
| type iv secretion system protein virb1 | SAMN06295984_3459 | Not Available | Negative | 3550127 - 3550792 | 23252.5 |
| hypothetical protein | SAMN06295984_3460 | Not Available | Negative | 3550807 - 3551130 | 11389.7 |
| hypothetical protein | SAMN06295984_3461 | Not Available | Negative | 3551190 - 3551498 | 11915.2 |
| hypothetical protein | SAMN06295984_3462 | Not Available | Positive | 3551658 - 3551906 | 9343.36 |
| hypothetical protein | SAMN06295984_3463 | Not Available | Positive | 3552209 - 3552991 | 29514.5 |
| toprim domain-containing protein | SAMN06295984_3464 | Not Available | Positive | 3553109 - 3553984 | 32095.7 |
| endonuclease yncb, thermonuclease family | SAMN06295984_3465 | Not Available | Positive | 3553978 - 3554568 | 22051.3 |
| hypothetical protein | SAMN06295984_3466 | Not Available | Positive | 3554685 - 3555005 | 10976.6 |
| chromosome partitioning protein, parb family | SAMN06295984_3467 | Not Available | Positive | 3555556 - 3557331 | 65173.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.