Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06295984_3436 | Not Available | Positive | 3525059 - 3526474 | 51016.3 |
| agmatine deiminase | SAMN06295984_3437 | Not Available | Positive | 3526467 - 3527591 | 41384.9 |
| carbamate kinase | SAMN06295984_3438 | Not Available | Positive | 3527594 - 3528493 | 31012.4 |
| l,d-transpeptidase catalytic domain | SAMN06295984_3439 | Not Available | Negative | 3528744 - 3529259 | 18561.2 |
| transcriptional regulator, lysr family | SAMN06295984_3440 | Not Available | Negative | 3529734 - 3530600 | 31086.6 |
| nad(p)h-quinone oxidoreductase subunit 5 | SAMN06295984_3441 | Not Available | Positive | 3530706 - 3532091 | 46931.6 |
| hypothetical protein | SAMN06295984_3442 | Not Available | Positive | 3532088 - 3532645 | 19628.0 |
| transposase and inactivated derivatives, tnpa family | SAMN06295984_3445 | Not Available | Positive | 3533955 - 3536924 | 109421.0 |
| hypothetical protein | SAMN06295984_3446 | Not Available | Negative | 3536984 - 3537214 | 8310.84 |
| hypothetical protein | SAMN06295984_3447 | Not Available | Negative | 3537763 - 3538941 | 43218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.