Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN06295984_3244 | Not Available | Negative | 3335772 - 3336596 | 28637.8 |
| septum formation protein | SAMN06295984_3245 | Not Available | Negative | 3336593 - 3337192 | 21133.5 |
| hypothetical protein | SAMN06295984_3246 | Not Available | Negative | 3337189 - 3338007 | 30235.1 |
| uroporphyrinogen decarboxylase | SAMN06295984_3247 | Not Available | Positive | 3338344 - 3339372 | 36482.9 |
| putative membrane protein | SAMN06295984_3248 | Not Available | Positive | 3339377 - 3339829 | 17345.9 |
| transcription termination factor rho | SAMN06295984_3249 | Not Available | Positive | 3340022 - 3341278 | 46597.1 |
| heme-degrading monooxygenase hmoa | SAMN06295984_3250 | Not Available | Positive | 3341285 - 3341578 | 11051.3 |
| integral membrane protein, yjbe family | SAMN06295984_3251 | Not Available | Positive | 3341575 - 3342297 | 25199.5 |
| hypothetical protein | SAMN06295984_3252 | Not Available | Positive | 3342361 - 3342762 | 14764.8 |
| glutamate synthase domain-containing protein 2 | SAMN06295984_3253 | Not Available | Negative | 3342759 - 3344357 | 58359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.