Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN06295984_3030 | Not Available | Positive | 3136095 - 3137423 | 49358.0 |
| mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN06295984_3031 | Not Available | Negative | 3137420 - 3138457 | 36107.0 |
| sugar transferase, pep-cterm system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN06295984_3032 | Not Available | Positive | 3138581 - 3139969 | 50594.1 |
| multi-sensor signal transduction histidine kinase | SAMN06295984_3033 | Not Available | Positive | 3139972 - 3142125 | 76660.1 |
| two component, sigma54 specific, transcriptional regulator, fis family | SAMN06295984_3034 | Not Available | Positive | 3142122 - 3143498 | 49953.2 |
| tetratricopeptide repeat-containing protein | SAMN06295984_3035 | Not Available | Positive | 3143499 - 3145343 | 65736.1 |
| transcriptional regulator, tetr family | SAMN06295984_3036 | Not Available | Positive | 3145457 - 3146083 | 21919.8 |
| tonb-dependent receptor plug domain | SAMN06295984_3038 | Not Available | Negative | 3146541 - 3149552 | 111198.0 |
| dna-binding transcriptional regulator, csgd family | SAMN06295984_3039 | Not Available | Negative | 3150035 - 3150577 | 18880.9 |
| uncharacterized membrane-anchored protein | SAMN06295984_3040 | Not Available | Positive | 3150669 - 3151436 | 26962.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.