Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna end-binding protein ku | SAMN06295984_2939 | Not Available | Positive | 3038273 - 3039133 | 31485.0 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN06295984_2940 | Not Available | Positive | 3039290 - 3041797 | 91276.0 |
| pilz domain-containing protein | SAMN06295984_2941 | Not Available | Positive | 3042096 - 3042716 | 22867.2 |
| hypothetical protein | SAMN06295984_2942 | Not Available | Negative | 3042722 - 3043381 | 24710.0 |
| n-carbamoylputrescine amidase | SAMN06295984_2943 | Not Available | Negative | 3043406 - 3044284 | 32295.6 |
| agmatine deiminase | SAMN06295984_2944 | Not Available | Negative | 3044638 - 3045621 | 34690.1 |
| zn-dependent amino- or carboxypeptidase, m28 family | SAMN06295984_2945 | Not Available | Negative | 3045636 - 3047333 | 60852.3 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06295984_2946 | Not Available | Positive | 3047499 - 3049481 | 71021.8 |
| ssu ribosomal protein s4p | SAMN06295984_2947 | Not Available | Negative | 3049543 - 3050154 | 23103.1 |
| isochorismate pyruvate lyase | SAMN06295984_2948 | Not Available | Positive | 3050353 - 3050667 | 11765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.