Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ccma, bactofilin family | SAMN06295984_2665 | Not Available | Negative | 2751896 - 2752291 | 13249.8 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN06295984_2666 | Not Available | Negative | 2752293 - 2753498 | 42750.0 |
| isoprenylcysteine carboxyl methyltransferase (icmt) family protein | SAMN06295984_2667 | Not Available | Positive | 2753741 - 2755153 | 52161.6 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN06295984_2668 | Not Available | Negative | 2755173 - 2755829 | 24183.3 |
| ste24 endopeptidase | SAMN06295984_2669 | Not Available | Negative | 2755826 - 2756986 | 42750.9 |
| dihydrodipicolinate reductase | SAMN06295984_2670 | Not Available | Negative | 2757066 - 2757791 | 25249.4 |
| nad-dependent deacetylase | SAMN06295984_2671 | Not Available | Positive | 2757919 - 2758623 | 25977.8 |
| trna(arg) a34 adenosine deaminase tada | SAMN06295984_2672 | Not Available | Negative | 2758627 - 2759082 | 16139.4 |
| lsu ribosomal protein l28p | SAMN06295984_2673 | Not Available | Positive | 2759212 - 2759505 | 10629.9 |
| hypothetical protein | SAMN06295984_2674 | Not Available | Negative | 2759545 - 2760531 | 35753.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.