Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted acetyltransferase, gnat family | SAMN06295984_2515 | Not Available | Negative | 2585502 - 2586185 | 24308.2 |
| dna replication and repair protein recn | SAMN06295984_2516 | Not Available | Negative | 2586182 - 2587867 | 58258.1 |
| beta-barrel assembly machine subunit bamd | SAMN06295984_2517 | Not Available | Negative | 2587917 - 2588711 | 29908.5 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN06295984_2518 | Not Available | Negative | 2588808 - 2589521 | 25018.2 |
| 16s rrna processing protein rimm | SAMN06295984_2519 | Not Available | Negative | 2589606 - 2590115 | 17461.8 |
| ssu ribosomal protein s16p | SAMN06295984_2520 | Not Available | Negative | 2590120 - 2590701 | 20045.0 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN06295984_2521 | Not Available | Negative | 2590747 - 2592192 | 50604.4 |
| diguanylate cyclase/phosphodiesterase | SAMN06295984_2522 | Not Available | Positive | 2592460 - 2594091 | 59309.8 |
| diaminopimelate epimerase | SAMN06295984_2523 | Not Available | Positive | 2594143 - 2594949 | 28444.1 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN06295984_2524 | Not Available | Positive | 2594946 - 2596262 | 46840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.