Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-carotene 3-hydroxylase | SAMN06295984_2485 | Not Available | Negative | 2558741 - 2559259 | 19096.4 |
| 3-isopropylmalate dehydratase, large subunit | SAMN06295984_2486 | Not Available | Positive | 2559395 - 2560825 | 50015.6 |
| gxxexxy protein | SAMN06295984_2487 | Not Available | Positive | 2560889 - 2561332 | 16281.0 |
| 3-isopropylmalate dehydratase, small subunit | SAMN06295984_2488 | Not Available | Positive | 2561329 - 2561925 | 21493.6 |
| nadph:quinone reductase | SAMN06295984_2489 | Not Available | Positive | 2561953 - 2562948 | 34347.2 |
| hypothetical protein | SAMN06295984_2490 | Not Available | Positive | 2562945 - 2563226 | 9747.04 |
| hypothetical protein | SAMN06295984_2491 | Not Available | Positive | 2563312 - 2563605 | 11068.5 |
| hypothetical protein | SAMN06295984_2492 | Not Available | Negative | 2563618 - 2564241 | 21980.0 |
| succinate dehydrogenase subunit a | SAMN06295984_2493 | Not Available | Negative | 2564253 - 2566055 | 65334.3 |
| succinate dehydrogenase subunit d | SAMN06295984_2494 | Not Available | Negative | 2566057 - 2566461 | 14379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.