Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surfeit locus 1 family protein | SAMN06295984_2165 | Not Available | Positive | 2243320 - 2244045 | 26091.3 |
| two-component system, sensor histidine kinase regb | SAMN06295984_2166 | Not Available | Positive | 2244042 - 2245349 | 45919.4 |
| two-component system, response regulator rega | SAMN06295984_2167 | Not Available | Positive | 2245346 - 2245876 | 19467.2 |
| ion channel | SAMN06295984_2168 | Not Available | Positive | 2246067 - 2246519 | 16632.8 |
| hydroxymethylglutaryl-coa lyase | SAMN06295984_2169 | Not Available | Negative | 2246524 - 2247432 | 31222.4 |
| formyl-coa transferase | SAMN06295984_2170 | Not Available | Positive | 2247570 - 2248736 | 41469.4 |
| prolyl oligopeptidase | SAMN06295984_2171 | Not Available | Positive | 2249091 - 2251244 | 78260.0 |
| gaf domain-containing protein | SAMN06295984_2172 | Not Available | Positive | 2251241 - 2251792 | 19000.8 |
| glycine zipper 2tm domain-containing protein | SAMN06295984_2173 | Not Available | Positive | 2251919 - 2252761 | 29924.9 |
| hypothetical protein | SAMN06295984_2174 | Not Available | Positive | 2252937 - 2253488 | 19473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.