Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1704830 - 1704906 | Not Available |
| 2'-5' rna ligase superfamily protein | SAMN06295984_1656 | Not Available | Negative | 1704966 - 1705571 | 21735.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295984_1657 | Not Available | Negative | 1705682 - 1706443 | 26904.3 |
| upf0755 protein | SAMN06295984_1658 | Not Available | Negative | 1706446 - 1707375 | 33353.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN06295984_1659 | Not Available | Negative | 1707442 - 1708701 | 43759.1 |
| acyl carrier protein | SAMN06295984_1660 | Not Available | Negative | 1709017 - 1709253 | 8457.84 |
| hypothetical protein | SAMN06295984_1661 | Not Available | Negative | 1709476 - 1711236 | 63818.2 |
| protein of unknown function | SAMN06295984_1662 | Not Available | Negative | 1711756 - 1712319 | 19953.1 |
| excinuclease abc subunit b | SAMN06295984_1663 | Not Available | Positive | 1712340 - 1714556 | 83214.2 |
| carboxypeptidase c (cathepsin a) | SAMN06295984_1664 | Not Available | Positive | 1714654 - 1716159 | 54669.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.