Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | SAMN06295984_1634 | Not Available | Positive | 1683569 - 1684600 | 37771.0 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN06295984_1635 | Not Available | Positive | 1684636 - 1686120 | 53866.2 |
| ubiquitin-hydrolase zn-finger-containing protein | SAMN06295984_1636 | Not Available | Negative | 1686193 - 1686495 | 11098.1 |
| cyclic nucleotide-regulated fad-dependent pyridine nucleotide-disulphide oxidoreductase | SAMN06295984_1637 | Not Available | Negative | 1686507 - 1688132 | 56427.9 |
| non-heme chloroperoxidase | SAMN06295984_1638 | Not Available | Negative | 1688189 - 1689025 | 30364.9 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN06295984_1639 | Not Available | Positive | 1689227 - 1689895 | 24045.9 |
| pas domain s-box-containing protein | SAMN06295984_1640 | Not Available | Positive | 1689997 - 1691514 | 53914.0 |
| two component transcriptional regulator, luxr family | SAMN06295984_1641 | Not Available | Positive | 1691511 - 1692149 | 23154.1 |
| response regulator receiver domain-containing protein | SAMN06295984_1642 | Not Available | Positive | 1692257 - 1692622 | 12930.5 |
| starvation-inducible dna-binding protein | SAMN06295984_1643 | Not Available | Negative | 1692990 - 1693517 | 19859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.