Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly machine subunit bamf | SAMN06295984_1181 | Not Available | Positive | 1211941 - 1212360 | 14149.6 |
| hypothetical protein | SAMN06295984_1182 | Not Available | Negative | 1212411 - 1213085 | 24984.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN06295984_1183 | Not Available | Negative | 1213111 - 1215039 | 68563.9 |
| hypothetical protein | SAMN06295984_1184 | Not Available | Negative | 1215086 - 1215313 | 7843.0 |
| dna-binding transcriptional regulator, lysr family | SAMN06295984_1185 | Not Available | Negative | 1215377 - 1216267 | 31569.8 |
| hypothetical protein | SAMN06295984_1186 | Not Available | Positive | 1216418 - 1217050 | 23534.8 |
| catechol 2,3-dioxygenase | SAMN06295984_1187 | Not Available | Positive | 1217047 - 1217454 | 14660.6 |
| 4-oxalocrotonate tautomerase | SAMN06295984_1188 | Not Available | Positive | 1217475 - 1217696 | 8004.57 |
| transporter family-2 protein | SAMN06295984_1189 | Not Available | Positive | 1217693 - 1218148 | 15513.3 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN06295984_1190 | Not Available | Positive | 1218259 - 1219776 | 56835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.