Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN06295984_0093 | Not Available | Negative | 97041 - 98075 | 37774.4 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN06295984_0094 | Not Available | Negative | 98072 - 99367 | 48072.7 |
| thymidylate synthase | SAMN06295984_0095 | Not Available | Negative | 99462 - 100397 | 35473.2 |
| dna repair protein radc | SAMN06295984_0096 | Not Available | Positive | 100528 - 100956 | 15595.7 |
| Trna-pro | Not Available | Not Available | Positive | 101063 - 101136 | Not Available |
| n-formylglutamate amidohydrolase | SAMN06295984_0098 | Not Available | Negative | 101321 - 102196 | 31037.3 |
| response regulator receiver protein | SAMN06295984_0099 | Not Available | Positive | 102348 - 102725 | 13879.7 |
| Trna-val | Not Available | Not Available | Positive | 102799 - 102870 | Not Available |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN06295984_0101 | Not Available | Positive | 102925 - 103839 | 31136.7 |
| atp-dependent dna helicase, rep family | SAMN06295984_0102 | Not Available | Positive | 103853 - 106162 | 86241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.