Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN06295984_1100 | Not Available | Negative | 1122531 - 1123235 | 26198.4 |
| formimidoylglutamate deiminase | SAMN06295984_1101 | Not Available | Negative | 1123232 - 1124587 | 46982.6 |
| imidazolonepropionase | SAMN06295984_1102 | Not Available | Positive | 1124673 - 1125878 | 41904.6 |
| histidine ammonia-lyase | SAMN06295984_1103 | Not Available | Positive | 1125857 - 1127404 | 52667.3 |
| formiminoglutamase | SAMN06295984_1104 | Not Available | Positive | 1127404 - 1128207 | 29300.4 |
| urocanate hydratase | SAMN06295984_1105 | Not Available | Positive | 1128204 - 1129868 | 60315.0 |
| fucose permease | SAMN06295984_1106 | Not Available | Negative | 1129865 - 1131112 | 44146.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295984_1107 | Not Available | Negative | 1131444 - 1133813 | 84773.7 |
| alpha,alpha-trehalose phosphorylase | SAMN06295984_1108 | Not Available | Negative | 1133828 - 1136815 | 106112.0 |
| transcriptional regulator, laci family | SAMN06295984_1109 | Not Available | Negative | 1136912 - 1137916 | 34909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.