Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis terrae |
| Strain | subsp. ummariensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
628266 bp
Thymine Count
616090 bp
Guanine Count
1150912 bp
Cytosine Count
1181743 bp
Genome Length
3577011 bp
Protein-coding Genes
3387 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN06295984_1049 | Not Available | Negative | 1070422 - 1070985 | 20815.7 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN06295984_1050 | Not Available | Negative | 1071161 - 1071880 | 25735.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295984_1051 | Not Available | Negative | 1071873 - 1072424 | 20366.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295984_1052 | Not Available | Negative | 1072434 - 1073648 | 43049.9 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN06295984_1053 | Not Available | Positive | 1073732 - 1074058 | 10917.6 |
| para-nitrobenzyl esterase | SAMN06295984_1054 | Not Available | Negative | 1074120 - 1075724 | 56962.7 |
| pa domain-containing protein | SAMN06295984_1055 | Not Available | Positive | 1075889 - 1077184 | 44172.8 |
| predicted arabinose efflux permease, mfs family | SAMN06295984_1057 | Not Available | Negative | 1078532 - 1080196 | 59135.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295984_1058 | Not Available | Negative | 1080267 - 1081166 | 30908.2 |
| transcriptional regulator, tetr family | SAMN06295984_1059 | Not Available | Negative | 1081261 - 1081959 | 26081.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.