Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | L286_04225 | Not Available | Positive | 800309 - 800563 | 9367.14 |
| hypothetical protein | L286_04230 | Not Available | Positive | 800560 - 801078 | 19289.2 |
| peptidase s26 | L286_04235 | Not Available | Positive | 801075 - 801620 | 19632.9 |
| hypothetical protein | L286_04240 | Not Available | Positive | 801667 - 802014 | 12671.7 |
| lytic transglycosylase | L286_04245 | Not Available | Positive | 802141 - 802782 | 23077.4 |
| type vi secretion protein | L286_04250 | Not Available | Positive | 803009 - 804766 | 64753.8 |
| conjugal transfer protein trag | L286_04255 | Not Available | Positive | 804792 - 806795 | 74211.8 |
| copg family transcripitonal regulator | L286_04260 | Not Available | Positive | 806805 - 807239 | 15987.1 |
| conjugal transfer protein trbb | L286_04265 | Not Available | Positive | 807547 - 808482 | 32950.0 |
| conjugal transfer protein trbc | L286_04270 | Not Available | Positive | 808479 - 808811 | 11516.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
