Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rrna methyltransferaseL286_03395Not AvailablePositive639783 - 64083538340.8
chorismate mutaseL286_03400Not AvailableNegative640939 - 64123811229.3
30s ribosomal protein s4L286_03405Not AvailablePositive641473 - 64208723162.1
peptidase m28L286_03410Not AvailablePositive642258 - 64390458559.1
2-nitropropane dioxygenaseL286_03415Not AvailablePositive644104 - 64503632544.1
alpha/beta hydrolaseL286_03420Not AvailableNegative645109 - 64598133087.1
hypothetical proteinL286_03425Not AvailablePositive646261 - 64723234231.4
n-carbamoylputrescine amidaseL286_03430Not AvailablePositive647348 - 64819631586.4
antibiotic biosynthesis monooxygenaseL286_03435Not AvailablePositive648240 - 6485069641.68
uracil-dna glycosylaseL286_03440Not AvailableNegative648496 - 64914923594.6

Displaying genes 831 – 840 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.