Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | L286_03185 | Not Available | Positive | 596857 - 598086 | 45795.8 |
| hypothetical protein | L286_03190 | Not Available | Positive | 598083 - 599870 | 65408.4 |
| integrase | L286_03195 | Not Available | Positive | 599867 - 602092 | 81142.5 |
| hypothetical protein | L286_03200 | Not Available | Positive | 602137 - 603039 | 33111.8 |
| hypothetical protein | L286_03215 | Not Available | Negative | 603338 - 603622 | 10347.2 |
| dna helicase ii | L286_03220 | Not Available | Positive | 603839 - 606115 | 84735.0 |
| Trna-ala | Not Available | Not Available | Positive | 606624 - 606699 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 606897 - 606972 | Not Available |
| hypothetical protein | L286_03235 | Not Available | Negative | 607062 - 607397 | 11964.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | L286_03240 | Not Available | Positive | 607547 - 608899 | 46319.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
