Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL286_02935Not AvailablePositive553483 - 55386914107.0
hypothetical proteinL286_02940Not AvailableNegative553916 - 55438016726.0
hypothetical proteinL286_02945Not AvailablePositive554480 - 5546867451.92
conjugal transfer protein tragL286_02950Not AvailableNegative554693 - 55738696328.6
conjugal transfer protein trahL286_02955Not AvailableNegative557511 - 55890249766.1
hypothetical proteinL286_02960Not AvailableNegative558977 - 55994235130.7
conjugal transfer protein tranL286_02965Not AvailableNegative559944 - 56177966126.4
type-f conjugative transfer system pilin assembly protein trbcL286_02970Not AvailableNegative561776 - 56253726728.0
conjugal transfer protein trauL286_02975Not AvailableNegative562534 - 56355637126.4
hypothetical proteinL286_02980Not AvailableNegative563553 - 5638229835.45

Displaying genes 741 – 750 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.