Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpaseL286_01675Not AvailableNegative325644 - 32690645936.4
sugar abc transporter substrate-binding proteinL286_01680Not AvailableNegative326929 - 32772628259.2
gellan polysaccharide biosynthesis protein gelfL286_01685Not AvailableNegative327737 - 32893944524.6
glycosyl hydrolase family 5L286_01690Not AvailableNegative328936 - 32998537597.0
hypothetical proteinL286_01695Not AvailablePositive330030 - 33060219510.8
oxidoreductaseL286_01700Not AvailableNegative330608 - 33160336126.6
hypothetical proteinL286_01705Not AvailableNegative331600 - 33232826639.2
hypothetical proteinL286_01710Not AvailableNegative332325 - 33404961709.4
dolichol-phosphate mannosyltransferaseL286_01715Not AvailablePositive334294 - 33522934116.3
hypothetical proteinL286_01720Not AvailablePositive335233 - 33621036453.5

Displaying genes 511 – 520 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.