Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorL286_01525Not AvailableNegative299729 - 2998905947.41
hypothetical proteinL286_01530Not AvailableNegative299942 - 30036114875.6
translation repressor releL286_01535Not AvailableNegative300397 - 30071712212.5
dna damage-inducible proteinL286_01540Not AvailableNegative300686 - 30096710314.4
transcription elongation protein sprtL286_01545Not AvailablePositive301382 - 30202322584.1
paraL286_01550Not AvailablePositive302150 - 30280322798.1
hypothetical proteinL286_01555Not AvailablePositive302860 - 3031148789.5
plasmid replication initiator repaL286_01560Not AvailableNegative303178 - 30429042000.3
hypothetical proteinL286_01565Not AvailableNegative305176 - 30653449397.2
resolvaseL286_01570Not AvailableNegative306531 - 30703118532.4

Displaying genes 481 – 490 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.