Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permeaseL286_01275Not AvailablePositive257363 - 25846038891.3
peptidylprolyl isomeraseL286_01280Not AvailableNegative258573 - 25913319323.3
30s ribosomal protein s21L286_01285Not AvailableNegative259216 - 2594228257.16
hypothetical proteinL286_01290Not AvailableNegative259547 - 2596874993.32
aldolaseL286_01295Not AvailablePositive259686 - 26041726948.3
histidine kinaseL286_01300Not AvailablePositive260574 - 26244568434.0
biotin synthaseL286_01305Not AvailablePositive262492 - 26373946658.0
hypothetical proteinL286_01310Not AvailablePositive263758 - 26416514791.6
hemerythrinL286_01315Not AvailablePositive264219 - 26468318043.8
dna polymeraseL286_01320Not AvailablePositive264689 - 26608351839.1

Displaying genes 431 – 440 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.