Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | L286_21765 | Not Available | Negative | 4328712 - 4330064 | 49334.1 |
| acetyl-coa carboxylase | L286_21770 | Not Available | Negative | 4330078 - 4330569 | 16356.7 |
| 3-dehydroquinate dehydratase | L286_21775 | Not Available | Negative | 4330648 - 4331088 | 16063.1 |
| bifunctional sulfur carrier protein/thiazole synthase | L286_21780 | Not Available | Positive | 4331263 - 4332225 | 33711.9 |
| lysr family transcriptional regulator | L286_21785 | Not Available | Negative | 4332222 - 4333136 | 32533.8 |
| succinyl-coa:3-ketoacid-coa transferase | L286_21790 | Not Available | Positive | 4333224 - 4333934 | 25551.7 |
| succinyl-coa:3-ketoacid-coa transferase | L286_21795 | Not Available | Positive | 4333934 - 4334569 | 22566.3 |
| hit family hydrolase | L286_21800 | Not Available | Positive | 4334674 - 4335114 | 16267.2 |
| glycosyl transferase | L286_21805 | Not Available | Positive | 4335145 - 4336443 | 47881.6 |
| hypothetical protein | L286_21810 | Not Available | Positive | 4336555 - 4337251 | 24233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
