Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b562 | L286_01225 | Not Available | Negative | 249096 - 249926 | 30724.4 |
| cytochrome c oxidase assembly protein | L286_01230 | Not Available | Negative | 249963 - 250538 | 21251.4 |
| hypothetical protein | L286_01235 | Not Available | Negative | 250538 - 250669 | 4657.81 |
| protoheme ix farnesyltransferase | L286_01240 | Not Available | Negative | 250666 - 251586 | 33216.5 |
| cytochrome c oxidase subunit i | L286_01245 | Not Available | Negative | 251704 - 253371 | 61076.9 |
| cytochrome c oxidase subunit ii | L286_01250 | Not Available | Negative | 253390 - 254403 | 35485.4 |
| orotate phosphoribosyltransferase | L286_01255 | Not Available | Positive | 254694 - 255275 | 20802.2 |
| pyridoxine 5'-phosphate synthase | L286_01260 | Not Available | Positive | 255279 - 256016 | 26178.6 |
| 4'-phosphopantetheinyl transferase | L286_01265 | Not Available | Positive | 256013 - 256414 | 14425.5 |
| signal peptidase i | L286_01270 | Not Available | Positive | 256446 - 257339 | 32598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
