Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | L286_21150 | Not Available | Negative | 4209595 - 4210011 | 15468.3 |
| hypothetical protein | L286_21165 | Not Available | Negative | 4210430 - 4210763 | 9798.45 |
| serine protease | L286_21170 | Not Available | Negative | 4210864 - 4212252 | 47153.5 |
| rna polymerase sigma70 | L286_21175 | Not Available | Positive | 4212279 - 4212767 | 18122.6 |
| anti-sigma factor | L286_21180 | Not Available | Positive | 4212764 - 4213459 | 24800.7 |
| tonb-denpendent receptor | L286_21185 | Not Available | Negative | 4213671 - 4216625 | 105023.0 |
| metallophosphoesterase | L286_21190 | Not Available | Negative | 4216645 - 4217409 | 28419.2 |
| deoxycytidine triphosphate deaminase | L286_21195 | Not Available | Negative | 4217453 - 4218007 | 20552.4 |
| cytidine deaminase | L286_21200 | Not Available | Negative | 4218014 - 4218472 | 15593.7 |
| glycoside hydrolase family 25 | L286_21205 | Not Available | Negative | 4218469 - 4219134 | 23978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
