Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor i | L286_20950 | Not Available | Negative | 4178270 - 4178695 | 15311.5 |
| rna pseudouridine synthase | L286_20955 | Not Available | Negative | 4178701 - 4179378 | 24140.2 |
| glycosyl transferase | L286_20960 | Not Available | Positive | 4179447 - 4180409 | 35567.0 |
| rna polymerase sigma factor sigj | L286_20965 | Not Available | Negative | 4180670 - 4181533 | 31642.2 |
| alkylhydroperoxidase | L286_20970 | Not Available | Negative | 4181530 - 4181985 | 16722.8 |
| glutamine cyclotransferase | L286_20975 | Not Available | Negative | 4182269 - 4183015 | 28406.9 |
| aminomethyltransferase | L286_20980 | Not Available | Negative | 4183012 - 4183749 | 26843.2 |
| dihydroorotase | L286_20985 | Not Available | Positive | 4183813 - 4185138 | 48192.3 |
| membrane protein | L286_20990 | Not Available | Negative | 4185135 - 4185992 | 30439.6 |
| membrane protein | L286_20995 | Not Available | Negative | 4186043 - 4186264 | 7633.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
