Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase subunit beta | L286_20135 | Not Available | Positive | 4011672 - 4012748 | 39224.9 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | L286_20140 | Not Available | Positive | 4012758 - 4014005 | 44611.6 |
| hypothetical protein | L286_20145 | Not Available | Negative | 4014061 - 4014528 | 17074.4 |
| permease | L286_20150 | Not Available | Positive | 4014701 - 4015855 | 41463.6 |
| Trna-asp | Not Available | Not Available | Positive | 4015897 - 4015973 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4016057 - 4016133 | Not Available |
| hypothetical protein | L286_20170 | Not Available | Negative | 4016780 - 4017022 | 9267.98 |
| 5-formyltetrahydrofolate cyclo-ligase | L286_20175 | Not Available | Negative | 4017019 - 4017597 | 21258.5 |
| hypothetical protein | L286_20180 | Not Available | Negative | 4017810 - 4018145 | 12285.7 |
| hypothetical protein | L286_20185 | Not Available | Negative | 4018138 - 4018350 | 7181.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
