Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | L286_20085 | Not Available | Positive | 4001798 - 4004287 | 91095.9 |
| hypothetical protein | L286_20090 | Not Available | Positive | 4004684 - 4004872 | 6153.28 |
| hypothetical protein | L286_20095 | Not Available | Negative | 4004973 - 4005422 | 15466.3 |
| adenylosuccinate lyase | L286_20100 | Not Available | Positive | 4005634 - 4006935 | 48363.0 |
| laci family transcription regulator | L286_20105 | Not Available | Negative | 4007060 - 4008106 | 37147.2 |
| arsr family transcriptional regulator | L286_20110 | Not Available | Negative | 4008174 - 4008665 | 18183.1 |
| Trna-pro | Not Available | Not Available | Positive | 4008723 - 4008799 | Not Available |
| dna repair protein radc | L286_20120 | Not Available | Negative | 4008904 - 4009197 | 11495.9 |
| thymidylate synthase | L286_20125 | Not Available | Positive | 4009355 - 4010290 | 35464.2 |
| 2-oxoisovalerate dehydrogenase subunit alpha | L286_20130 | Not Available | Positive | 4010398 - 4011693 | 47275.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
