Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | L286_19510 | Not Available | Positive | 3895272 - 3895523 | 8879.37 |
| hypothetical protein | L286_19515 | Not Available | Positive | 3895813 - 3896382 | 21121.2 |
| tonb-denpendent receptor | L286_19520 | Not Available | Positive | 3897146 - 3899488 | 84539.8 |
| short-chain dehydrogenase | L286_19525 | Not Available | Negative | 3899485 - 3900264 | 27679.3 |
| hypothetical protein | L286_19530 | Not Available | Positive | 3900536 - 3901291 | 26589.9 |
| vanillate o-demethylase oxygenase subunit | L286_19535 | Not Available | Negative | 3901312 - 3902622 | 48137.1 |
| fis family transcriptional regulator | L286_19540 | Not Available | Positive | 3902667 - 3904406 | 62763.8 |
| lysr family transcriptional regulator | L286_19545 | Not Available | Negative | 3904420 - 3905349 | 34073.2 |
| 2-hydroxymuconic semialdehyde dehydrogenase | L286_19550 | Not Available | Positive | 3905471 - 3906913 | 51110.8 |
| 2-keto-4-pentenoate hydratase | L286_19555 | Not Available | Positive | 3906910 - 3907719 | 28192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
