Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome cL286_00970Not AvailableNegative196526 - 19700216492.8
quinoprotein glucose dehydrogenaseL286_00975Not AvailableNegative197019 - 19900471973.8
hypothetical proteinL286_00980Not AvailablePositive199003 - 1990983295.18
succinate-semialdehyde dehdyrogenaseL286_00985Not AvailableNegative199130 - 20061451786.1
alcohol dehydrogenaseL286_00990Not AvailableNegative200635 - 20187042981.7
hypothetical proteinL286_00995Not AvailableNegative201867 - 20216510151.3
mfs transporter permeaseL286_01005Not AvailableNegative202309 - 20357145217.8
amidohydrolaseL286_01010Not AvailableNegative203626 - 20499649006.0
gntr family transcriptional regulatorL286_01015Not AvailableNegative205220 - 20594526593.6
glycerol-3-phosphataseL286_01020Not AvailableNegative206051 - 20671623408.3

Displaying genes 371 – 380 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.