Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine monophosphate synthase | L286_18685 | Not Available | Negative | 3741089 - 3741652 | 20556.4 |
| alanine racemase | L286_18690 | Not Available | Positive | 3741670 - 3742416 | 26123.6 |
| tonb-denpendent receptor | L286_18695 | Not Available | Negative | 3742394 - 3745159 | 97415.3 |
| phosphoesterase | L286_18700 | Not Available | Negative | 3745350 - 3746009 | 23781.6 |
| hypothetical protein | L286_18705 | Not Available | Positive | 3746063 - 3746911 | 30456.1 |
| helicase | L286_18710 | Not Available | Negative | 3747397 - 3749808 | 88818.8 |
| methionine gamma-lyase | L286_18715 | Not Available | Positive | 3750080 - 3751417 | 47714.2 |
| 2-hydroxyacid dehydrogenase | L286_18720 | Not Available | Positive | 3751414 - 3752343 | 33189.5 |
| haloacid dehalogenase | L286_18725 | Not Available | Negative | 3752410 - 3753057 | 24099.5 |
| abc transporter permease | L286_18730 | Not Available | Positive | 3753163 - 3754293 | 40448.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
