Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | L286_17015 | Not Available | Negative | 3390102 - 3391046 | 33591.5 |
| type vi secretion protein | L286_17020 | Not Available | Negative | 3391277 - 3391996 | 25514.2 |
| transporter | L286_17025 | Not Available | Negative | 3392000 - 3394408 | 89119.6 |
| type vi secretion protein | L286_17030 | Not Available | Negative | 3394401 - 3394751 | 12653.7 |
| type vi secretion protein | L286_17035 | Not Available | Negative | 3394748 - 3395086 | 11684.7 |
| conjugal transfer protein | L286_17040 | Not Available | Negative | 3395083 - 3395751 | 23069.5 |
| hypothetical protein | L286_17045 | Not Available | Negative | 3395748 - 3396086 | 12082.7 |
| phytanoyl-coa dioxygenase | L286_17050 | Not Available | Negative | 3396137 - 3397081 | 34353.9 |
| autoinducer synthase | L286_17055 | Not Available | Negative | 3397092 - 3397703 | 22744.5 |
| luxr family transcriptional regulator | L286_17060 | Not Available | Negative | 3397776 - 3398519 | 27099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
