Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease | L286_16965 | Not Available | Negative | 3377182 - 3380481 | 119241.0 |
| deor family transcriptional regulator | L286_16970 | Not Available | Positive | 3380587 - 3381570 | 36949.7 |
| hypothetical protein | L286_16975 | Not Available | Negative | 3381607 - 3382440 | 31170.7 |
| hypothetical protein | L286_16980 | Not Available | Negative | 3382444 - 3383136 | 26399.7 |
| hypothetical protein | L286_16985 | Not Available | Negative | 3383182 - 3383442 | 9591.5 |
| conjugal transfer protein trag | L286_16990 | Not Available | Negative | 3384035 - 3385996 | 70874.0 |
| type iv secretion protein virb11 | L286_16995 | Not Available | Negative | 3385980 - 3386984 | 36401.7 |
| conjugal transfer protein trbi | L286_17000 | Not Available | Negative | 3386988 - 3388106 | 38573.7 |
| p-type conjugative transfer protein virb9 | L286_17005 | Not Available | Negative | 3388215 - 3389072 | 31340.3 |
| conjugal transfer protein traj | L286_17010 | Not Available | Negative | 3389069 - 3389638 | 21331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
