Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbj | L286_16665 | Not Available | Positive | 3314645 - 3315400 | 27390.0 |
| conjugal transfer protein trbl | L286_16670 | Not Available | Positive | 3315541 - 3316854 | 44422.8 |
| conjugal transfer protein trbf | L286_16675 | Not Available | Positive | 3316858 - 3317679 | 30015.1 |
| conjugal transfer protein trbg | L286_16680 | Not Available | Positive | 3317676 - 3318512 | 30277.5 |
| conjugal transfer protein trbi | L286_16685 | Not Available | Positive | 3318509 - 3319708 | 41466.8 |
| hypothetical protein | L286_16690 | Not Available | Positive | 3319710 - 3319889 | 6237.53 |
| integrase | L286_16695 | Not Available | Positive | 3320205 - 3321434 | 45795.8 |
| hypothetical protein | L286_16700 | Not Available | Positive | 3321431 - 3323218 | 65408.4 |
| integrase | L286_16705 | Not Available | Positive | 3323215 - 3325440 | 81142.5 |
| hypothetical protein | L286_16710 | Not Available | Positive | 3325485 - 3326387 | 33111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
