Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-denpendent receptor | L286_16615 | Not Available | Negative | 3300781 - 3303231 | 86738.2 |
| tonb-denpendent receptor | L286_16620 | Not Available | Negative | 3303474 - 3306173 | 96789.1 |
| hypothetical protein | L286_16625 | Not Available | Negative | 3306272 - 3307096 | 29303.4 |
| rna polymerase | L286_16630 | Not Available | Negative | 3307260 - 3307808 | 20630.4 |
| conjugal transfer protein trag | L286_16635 | Not Available | Positive | 3308202 - 3310196 | 72875.9 |
| copg family transcriptional regulator | L286_16640 | Not Available | Positive | 3310200 - 3310613 | 15077.1 |
| conjugal transfer protein trbb | L286_16645 | Not Available | Positive | 3310610 - 3311596 | 35653.3 |
| conjugal transfer protein trbc | L286_16650 | Not Available | Positive | 3311600 - 3311935 | 11555.3 |
| conjugal transfer protein trbd | L286_16655 | Not Available | Positive | 3311932 - 3312204 | 9308.55 |
| conjugal transfer protein trbe | L286_16660 | Not Available | Positive | 3312198 - 3314648 | 89118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
