Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | L286_16100 | Not Available | Negative | 3187595 - 3187768 | 6359.46 |
| protease | L286_16105 | Not Available | Positive | 3187866 - 3188786 | 32029.9 |
| transposase is6501 | L286_16110 | Not Available | Negative | 3188856 - 3189236 | 13951.1 |
| transposase | L286_16115 | Not Available | Negative | 3189245 - 3189490 | 8907.57 |
| insertion element is402 protein | L286_16120 | Not Available | Positive | 3189755 - 3190108 | 13303.9 |
| transposase | L286_16125 | Not Available | Positive | 3190126 - 3190512 | 14371.7 |
| heparinase | L286_16130 | Not Available | Negative | 3190669 - 3192435 | 63066.9 |
| ribulose-phosphate 3-epimerase | L286_16135 | Not Available | Negative | 3192432 - 3193094 | 23460.4 |
| diguanylate cyclase | L286_16140 | Not Available | Negative | 3193199 - 3193684 | 17880.6 |
| sam-dependent methlyltransferase | L286_16145 | Not Available | Negative | 3193729 - 3195018 | 45390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
