Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell filamentation protein fic | L286_15595 | Not Available | Negative | 3078016 - 3079596 | 58601.1 |
| Trna-thr | Not Available | Not Available | Positive | 3080067 - 3080141 | Not Available |
| hypothetical protein | L286_15605 | Not Available | Positive | 3080232 - 3080390 | 6162.12 |
| x-pro aminopeptidase | L286_15610 | Not Available | Negative | 3080401 - 3082182 | 63832.5 |
| peptidase s9 | L286_15615 | Not Available | Positive | 3082342 - 3084351 | 74941.5 |
| thioesterase | L286_15620 | Not Available | Positive | 3084494 - 3084892 | 14930.6 |
| membrane protein | L286_15625 | Not Available | Negative | 3084981 - 3085961 | 36452.6 |
| metal abc transporter permease | L286_15630 | Not Available | Negative | 3086202 - 3088061 | 68281.8 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | L286_15635 | Not Available | Negative | 3088207 - 3089046 | 29428.3 |
| had family hydrolase | L286_15640 | Not Available | Negative | 3089043 - 3089714 | 24996.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
