Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | L286_15545 | Not Available | Positive | 3065435 - 3066136 | 25082.7 |
| acetyl-coa acetyltransferase | L286_15550 | Not Available | Positive | 3066193 - 3067368 | 40791.1 |
| marr family transcriptional regulator | L286_15555 | Not Available | Positive | 3067420 - 3067896 | 17996.5 |
| phenylacetate degradation protein | L286_15560 | Not Available | Positive | 3068675 - 3069424 | 27337.2 |
| 3-hydroxyacyl-coa dehydrogenase | L286_15565 | Not Available | Positive | 3069542 - 3071614 | 73820.7 |
| acyl-coa dehydrogenase | L286_15570 | Not Available | Positive | 3071611 - 3073410 | 66363.0 |
| 2-alkenal reductase | L286_15575 | Not Available | Positive | 3073423 - 3074424 | 35044.1 |
| 4-coumarate--coa ligase | L286_15580 | Not Available | Positive | 3074441 - 3076006 | 55835.3 |
| 3-hydroxyacyl-coa dehydrogenase | L286_15585 | Not Available | Positive | 3076214 - 3077128 | 31610.0 |
| hypothetical protein | L286_15590 | Not Available | Positive | 3077162 - 3077878 | 26927.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
