Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hyld | L286_00540 | Not Available | Negative | 108213 - 109385 | 40457.3 |
| transglycosylase | L286_00545 | Not Available | Positive | 109573 - 109821 | 8478.85 |
| transglycosylase | L286_00550 | Not Available | Negative | 109882 - 110136 | 8740.24 |
| hypothetical protein | L286_00555 | Not Available | Negative | 110295 - 110594 | 11306.6 |
| hypothetical protein | L286_00560 | Not Available | Negative | 110701 - 110997 | 10036.1 |
| thiouridylase | L286_00565 | Not Available | Positive | 111122 - 112243 | 39746.6 |
| atp phosphoribosyltransferase | L286_00570 | Not Available | Positive | 112376 - 113038 | 23901.9 |
| histidinol dehydrogenase | L286_00575 | Not Available | Positive | 113081 - 114370 | 45287.6 |
| transcription antitermination protein nusb | L286_00580 | Not Available | Positive | 114408 - 114854 | 16743.9 |
| thiamine-monophosphate kinase | L286_00585 | Not Available | Positive | 114948 - 115862 | 31485.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
