Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | L286_14300 | Not Available | Positive | 2810083 - 2811405 | 48836.6 |
| fumarylacetoacetase | L286_14305 | Not Available | Positive | 2811402 - 2812703 | 46378.1 |
| maleylacetoacetate isomerase | L286_14310 | Not Available | Positive | 2812700 - 2813341 | 23348.7 |
| atp synthase subunit e | L286_14315 | Not Available | Positive | 2813425 - 2813892 | 17006.5 |
| formate dehydrogenase subunit beta | L286_14320 | Not Available | Positive | 2813889 - 2815469 | 54998.0 |
| formate dehydrogenase subunit alpha | L286_14325 | Not Available | Positive | 2815466 - 2818312 | 103602.0 |
| nad-dependent formate dehydrogenase subunit delta | L286_14330 | Not Available | Positive | 2818323 - 2818559 | 8381.16 |
| formate dehydrogenase accessory protein fdhd | L286_14335 | Not Available | Positive | 2818556 - 2819374 | 28848.5 |
| nad(p) transhydrogenase subunit beta | L286_14340 | Not Available | Negative | 2819445 - 2820839 | 48224.6 |
| pyridine nucleotide transhydrogenase subunit alpha | L286_14345 | Not Available | Negative | 2820841 - 2821131 | 10277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
